Pharma Services – Customized Image Analysis

Leverage our extensive expertise in image analysis in histology, hematology and microbiology.

• Quantitative analysis of whole-slide-images (WSIs) using HALO, MICAIA or custom algorithms
• Immunofluorescence colocalization
• Cell-based Immunohistochemistry (IHC) scoring
• Cell interactions
• Support of a wide range of image formats, including OME-TIFF, MRXS, SVS, TIFF and many more.
• Custom algorithm and tools development
• Digitization of glass slides (multiple resolutions, multiple formats, dry or oil)
• Creation of multi-scanner datasets for deep learning
• Efficient tissue or cells annotation

• Quantitative analysis of endoscopy videos
• “Video to Excel”
• Data Annotation tools and workflows, incl. webbased annotation server
• AI assisted annotation: annotate first data, train model, predict remaining data, correct mistakes, retrain model, re-predict, …
• Tests and evaluations on various phantoms

We have the best infrastructure at our hands:

• Premium digital pathology image analysis platforms
  • HALO and HALO AI by Indica Labs
  • MICAIA^® studio by Fraunhofer IIS
  • SlideMatch for Slide alignment
• Slide Scanners and Microscopes from multiple vendors
  • Zeiss AxioScan, Zeiss AxioImager, Motic EasyScan, PreciPoint M8, Fraunhofer SCube^®, Fraunhofer iSTIX^®
  • Facilitates creation of multi-scanner datasets for robust AI model training
• On Site Deep Learning Cluster
  • 34 nodes, 88 GPUs
• Safe data exchange via the Fraunhofer ownCloud or FTP server.
• Custom development in Python or C++, e.g using SciKit, NumPy, OpenCV, TensorFlow, ...